Man pages for royfrancis/pophelper
Tabulate, Analyse and Visualise Admixture Proportions
| alignK | Align clusters |
| analyseQ | Analyse STRUCTURE, TESS, BAPS or BASIC text runs. Wrapper... |
| as.qlist | Convert a qlist or qlist-like list to a valid qlist. |
| clumppExport | Generate CLUMPP output from a qlist |
| collectClumppOutput | Collect CLUMPP output files from multiple folders |
| collectRunsTess | Collect TESS run results from multiple folders |
| distructColours | Vector of 90 Distruct colours |
| distructExport | Generate files for DISTRUCT. |
| evannoMethodStructure | Perform the Evanno method for STRUCTURE runs. |
| is.qlist | Verify if a qlist is formatted correctly. |
| joinQ | Combine two or more qlist objects into one |
| mergeQ | Merge replicate runs of the same K |
| plotQ | Generate barplots from qlists. |
| plotQMultiline | Plot a qlist as individual-level multiline barplot |
| readQ | Convert run files (q-matrices) to qlist. |
| readQBaps | Convert BAPS cluster files to qlist. |
| readQBasic | Convert delimited text files to qlist. |
| readQClumpp | Convert CLUMPP format numeric text files to qlist. |
| readQStructure | Convert STRUCTURE run files to qlist. |
| readQTess | Convert TESS cluster files to qlist. |
| readQTess3 | Convert TESS3 R object to pophelper qlist. |
| sortQ | Sort runs in a qlist based on an attribute |
| splitQ | Split a qlist into sublists by attribute |
| summariseQ | Summarise a tabulated dataframe |
| tabulateQ | Tabulate runs from a qlist |
| verifyGrplab | Verify a grplab dataframe |
