sortQ: Sort runs in a qlist based on an attribute

In royfrancis/pophelper: Tabulate, Analyse and Visualise Admixture Proportions

Description

Sort runs in a qlist based on an attribute

Usage

sortQ(qlist, by = "k", decreasing = FALSE, debug = FALSE)

Arguments

qlist	A qlist object
by	A valid attribute name. Generally 'k' or 'ind'. Structure runs can take loci, burin, reps etc. Can take more than one name to arrange by multiple fields. For example by=c("ind","k"). See details.
decreasing	A logical indicating the direction of sorting.
debug	Logical for internal use

Details

Argument 'by' can be any attribute name returned by sapply(qlist,attributes) except 'names', 'class' and 'row.names'. This is usually similar to tabulateQ(qlist,sorttable=FALSE).

Value

A sorted qlist object

Examples

sfiles <- list.files(path=system.file("files/structure",package="pophelper"), full.names=TRUE)
slist <- readQ(sfiles)
slist_1 <- sortQ(slist)
names(slist)
names(slist_1)

royfrancis/pophelper documentation built on Jan. 1, 2021, 4:58 p.m.