| CPTAC_exp_counts | Peptides in the CPTAC database |
| create_peptidome | Peptidome Generator |
| peptide_predictions | Peptide Detectability Predictor |
| peptides_inReference | Peptide Reference Merger |
| prioritize_peptides | Peptide Prioritizer |
| ProtDB_exp_counts | Peptides in the ProteomicsDB database |
| RFmodel_CPTAC | CPTAC Trained Random Forest |
| RFmodel_ProteomicsDB | ProteomicsDB Trained Random Forest |
| SwissProt2018_peptidome | Uniprot/Swiss-Prot Peptidome |
| SwissProt2018_peptidome_synth | Uniprot/Swiss-Prot Synthetic-Friendly Peptidome |
| tm_peptides | List of Transmembrane Peptides |
| train_RFmodel | RF Model Training |
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