SwissProt2018_peptidome_synth: Uniprot/Swiss-Prot Synthetic-Friendly Peptidome

In rr-2/PeptideRanger:

Uniprot/Swiss-Prot Synthetic-Friendly Peptidome

Description

Filtered version of SwissProt2018_peptidome that does not include peptides that are challening to synthesize. This currently excludes peptides with N-term Q and E residues and with C-term P residues.

Usage

SwissProt2018_peptidome_synth

Format

A data frame with 1694311 rows and 7 variables:

symbol

gene symbol of parent protein

uniprot

uniprot ID of parent protein

missed_cleavages

number of MCs that peptide resulted from

sequence

amino acid sequence of peptide

start

parent protein position of first residue in peptide

end

parent protein position of last residue in peptide

size

number of amino acid residues in peptide

rr-2/PeptideRanger documentation built on May 27, 2023, 4:43 p.m.