check_if_pretransformed_eset: Function that performs a few tests to check if a given...

In russHyde/miiq: Microarrays Are Awesome: Get Them Analysed HERE!

Description

Function that performs a few tests to check if a given ExpressionSet has already been log-transformed

Usage

check_if_pretransformed_eset(eset = NULL,
  range_limit_if_transformed = 1000, skew_threshold = 3)

Arguments

eset	an ExpressionSet.
range_limit_if_transformed	the largest possible range between high and low values if the ESet is already transformed.
skew_threshold	if the skewness of all columns of the dataset is greater than this threshold, the dataset is assumed untransformed.

russHyde/miiq documentation built on Dec. 25, 2019, 10:56 a.m.