dl_gds_to_gpl: Obtains the GPL accession(s) for a set of input GDS uids from...
In russHyde/miiq: Microarrays Are Awesome: Get Them Analysed HERE!
View source: R/download_functions.R
Description
Uses NCBI-eUtils. Takes GEO dataset UIDs (of the format 200012345) and
creates a mapping from these UIDs to the (default) GEO platform accession
number used by GEO to annotate the GEO dataset. GPL accessions will be of
the form "GPL1234" and GDS uids will be returned in the same for as input
(ie, 200012345). Does not make an effort to ensure input order is the same
as output order.
Usage
1
2
3
dl_gds_to_gpl(ids,
eutils_prefix = paste0("https://eutils.ncbi.nlm.nih.gov/",
"entrez/eutils/esummary.fcgi?db=gds"))
Arguments
ids
ABC
eutils_prefix
DEF
russHyde/miiq documentation built on Dec. 25, 2019, 10:56 a.m.
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View source: R/download_functions.R
Description
Uses NCBI-eUtils. Takes GEO dataset UIDs (of the format 200012345) and creates a mapping from these UIDs to the (default) GEO platform accession number used by GEO to annotate the GEO dataset. GPL accessions will be of the form "GPL1234" and GDS uids will be returned in the same for as input (ie, 200012345). Does not make an effort to ensure input order is the same as output order.
Usage
1 2 3 | dl_gds_to_gpl(ids,
eutils_prefix = paste0("https://eutils.ncbi.nlm.nih.gov/",
"entrez/eutils/esummary.fcgi?db=gds"))
|
Arguments
ids |
ABC |
eutils_prefix |
DEF |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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