dot-make_gpl_url: Converts a GPL accession number into the FTP URL for that...
In russHyde/miiq: Microarrays Are Awesome: Get Them Analysed HERE!
Description
Converts a GPL accession number into the FTP URL for that annotation
dataset.
Usage
1
2
.make_gpl_url(gpl_acc, annot_gpl = TRUE,
ftp_prefix = paste0("ftp://ftp.ncbi.nlm.nih.gov/", "geo/platforms"))
Arguments
gpl_acc
String. A single GPL accession number, as used
at Gene-Expression Omnibus. Of the form GPL12345.
annot_gpl
Logical. Should the function return the URL for
the most recent (NCBI-constructed) annotations for the platform, or the
user/vendor-submitted 'soft' file.
ftp_prefix
Prefix for the URL.
russHyde/miiq documentation built on Dec. 25, 2019, 10:56 a.m.
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Description
Converts a GPL accession number into the FTP URL for that annotation dataset.
Usage
1 2 | .make_gpl_url(gpl_acc, annot_gpl = TRUE,
ftp_prefix = paste0("ftp://ftp.ncbi.nlm.nih.gov/", "geo/platforms"))
|
Arguments
gpl_acc |
String. A single GPL accession number, as used at Gene-Expression Omnibus. Of the form GPL12345. |
annot_gpl |
Logical. Should the function return the URL for the most recent (NCBI-constructed) annotations for the platform, or the user/vendor-submitted 'soft' file. |
ftp_prefix |
Prefix for the URL. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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