The list contains 5 elements:
List of raw Hi-C contact maps in sparse format (i.e.: data frame with columns: i,j,val,diagonal,name) from GSE63525 study. The list only contains contact map of chromosome 21, first replicate.
List of raw Hi-C contact maps in sparse format (i.e.: data frame with columns: i,j,val,diagonal,name) from GSE52457 study. The list only contains contact map of chromosome 21, first replicate.
HiCcomparator object constructed from the above 2 datasets with parameters as indicated in vignette.
HiCglm object constructed from the above 2 datasets with parameters as indicated in vignette.
List with names matching names (chromosomes) from first two datasets and values equal to their sizes (number of bins in contact map).
1 |
An object of class list
of length 5.
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