sa-lee/fluentGenomics: A plyranges and tximeta workflow
An extended workflow using the plyranges and tximeta packages for fluent genomic data analysis. Use tximeta to correctly import RNA-seq transcript quantifications and summarize them to gene counts for downstream analysis. Use plyranges for clearly expressing operations over genomic coordinates and to combine results from differential expression and differential accessibility analyses.
Getting started
Browse package contents
Package details |
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| Bioconductor views | BasicWorkflow GeneExpressionWorkflow Workflow |
| Maintainer | |
| License | MIT + file LICENSE |
| Version | 1.13.0 |
| URL | https://github.com/sa-lee/fluentGenomics |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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