saezlab/PHONEMeS: tool to run PHONEMeS on phosphoproteomic data

This package runs CARNIVAL for phosphoproteomic data with a prior knowledge network consisting of protein-protein and protein-phosphosite interactions form OmnipathR.

Getting started

Package details

Bioconductor views CellBiology Network Pathways Proteomics
MaintainerS. Müller-Dott <sophia.mueller-dott@uni-heidelberg.de>
LicenseGPL-3 + file LICENSE
Version2.0.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("saezlab/PHONEMeS")
saezlab/PHONEMeS documentation built on May 2, 2024, 11:12 a.m.