saezlab/PHONEMeS-ILP: Building logic-based models from discovery high-content phosphoproteomics data
This package implements a method to build logic-based models of signalling networks based on mass spectrometry phosphoproteomics data and kinase/phosphatase-substrate relationships. The method was described in this publication: Large-scale models of signal propagation in human cells derived from discovery phosphoproteomic data, Terfve et al., Nature Communications, 2015.
Getting started
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Package details |
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| Author | E. Gjerga, C.D.A. Terfve, A. Dugourd, L. Tobalina |
| Maintainer | E. Gjerga <enio.gjerga@gmail.com> |
| License | GPL-2 |
| Version | 1.0.0 |
| URL | https://github.com/saezlab/PHONEMeS-ILP |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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