run_eval: Run evaluation of results from decouple.

In saezlab/decoupleRBench: Benchmark of decoupleR methods.

Run evaluation of results from decouple.

Description

Run evaluation of results from decouple.

Usage

run_eval(
  bench_env,
  .design,
  res,
  .form = TRUE,
  .perform = TRUE,
  .downsample_pr = FALSE,
  .downsample_roc = FALSE,
  .downsample_times = 100,
  .silent = F
)

Arguments

.design	design tibble.
res	results from decouple.
.form	bool whether to format or not
.perform	bool whether to calculate ROC and performance summary
.downsample_pr	whether to downsample precision recall curve TNs
.downsample_roc	whether to downsample ROC true negatives
.downsample_times	downsampling iterations
.silent	Whether to run without verbose.

Value

An S4 object of BenchResult-class

saezlab/decoupleRBench documentation built on March 20, 2022, 3:02 p.m.