df2regulon: Construction of dorothea regulons for viper analysis
In saezlab/dorothea: Collection Of Human And Mouse TF Regulons
df2regulon R Documentation
Construction of dorothea regulons for viper analysis
Description
This function converts DoRothEA's regulons that are stored in a table to the
format required by the viper function.
Usage
df2regulon(df)
Arguments
df
A regulon table from dorothea package.
Value
Regulons in the viper format.
Examples
# acessing (human) dorothea regulons
# for mouse regulons: data(dorothea_mm, package = "dorothea")
data(dorothea_hs, package = "dorothea")
# convert to the format required by viper
viper_regulons = df2regulon(dorothea_hs)
saezlab/dorothea documentation built on Feb. 24, 2024, 8:12 p.m.
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| df2regulon | R Documentation |
Construction of dorothea regulons for viper analysis
Description
This function converts DoRothEA's regulons that are stored in a table to the
format required by the viper function.
Usage
df2regulon(df)
Arguments
df |
A regulon table from dorothea package. |
Value
Regulons in the viper format.
Examples
# acessing (human) dorothea regulons
# for mouse regulons: data(dorothea_mm, package = "dorothea")
data(dorothea_hs, package = "dorothea")
# convert to the format required by viper
viper_regulons = df2regulon(dorothea_hs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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