dorothea_mm_pancancer | R Documentation |
A table reporting signed human TF-target interactions. The difference to "dorothea_mm" is that TGCA gene expression data was used instead of GTEx to infer the networks with ARACNE.This database covers in total 1096 TFs targeting 17,695 genes with 187,955 unique interactions. In addition, each TF is accompanied with an empirical confidence level that was derived from the number of supporting evidences for this TF/interaction. The range is from A (high quality) to E (low quality).
A table of mouse TF-target interactions:
TF identifier as MGI symbols
summary confidence score classifying regulons based on their quality
target identifier as MGI symbols
mode of regulation indicating the effect of a TF on the target
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