dorothea_hs: Human DoRothEA

dorothea_hsR Documentation

Human DoRothEA

Description

A table reporting signed human TF-target interactions. This database covers in total 1395 TFs targeting 20,244 genes with 486,676 unique interactions. In addition, each TF is accompanied with an empirical confidence level that was derived from the number of supporting evidences for this TF/interaction. The range is from A (high quality) to E (low quality).

Format

A table of human TF-target interactions:

tf

TF identifier as HGNC symbols

confidence

Summary confidence score classifying regulons based on their quality

target

target identifier as HGNC symbols

mor

mode of regulation indicating the effect of a TF on the target

Source

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6673718/


saezlab/dorothea documentation built on Feb. 24, 2024, 8:12 p.m.