calcAllPairsDistances: Pre-processing Step

Description Usage Arguments

Description

Before applying GeneSurrounder, the distances on the global network should be calculated

Usage

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calcAllPairsDistances(network, directionPaths = "all", weightVector = NULL,
  networkName)

Arguments

network

An igraph network on which to calculate the distances.

directionPaths

defaults to "all". A string indicating how the distances should be calculated.

weightVector

defaults to NULL. A numeric vector giving edge weights.

networkName

A string containg the name of the network.


sahildshah1/gene-surrounder documentation built on May 27, 2019, 7:27 a.m.