API for saketkc/covmuller
A tool to model COVID19 variant prevalence using data from GISAID
| Global functions | |
|---|---|
| BarPlot | Source code |
| CleanAmericanStates | Man page Source code |
| CleanCanadaStates | Man page Source code |
| CleanIndianStates | Man page Source code |
| CleanSouthAfricanStates | Man page Source code |
| CollapseLineageToVOCs | Man page Source code |
| CombineSequencedCases | Man page Source code |
| CountsToPrevalence | Man page Source code |
| CovmullerTheme | Man page Source code |
| FilterGISAIDIndia | Man page Source code |
| FitMultinom | Source code |
| FitMultinomStatewiseDaily | Source code |
| FitMultinomWeekly | Source code |
| FixDate | Man page Source code |
| FormatGISAIDMetadata | Man page Source code |
| GeocodeAddress | Man page Source code |
| GetFiletype | Man page Source code |
| GetIndiaConfirmedCasesCumulative | Man page Source code |
| GetIndiaConfirmedCasesMonthlyLong | Man page Source code |
| GetIndiaConfirmedCasesWeeklyLong | Man page Source code |
| GetIndiaDailyCasesCumulative | Man page Source code |
| GetIndiaDailyData | Man page Source code |
| GetIndiaDeceasedCasesCumulative | Man page Source code |
| GetIndiaHospitalization | Man page Source code |
| GetIndianStates | Man page Source code |
| GetMonthYear | Man page Source code |
| GetVOCs | Man page Source code |
| KeepNonYellow | Source code |
| PlotMullerDailyPrevalence | Source code |
| PlotSequencedPropHeatmap | Man page Source code |
| PlotTotalHeatmap | Man page Source code |
| PlotVariantPrevalenceAnimated | Source code |
| ReadAuspiceInstrument | Man page Source code |
| ReadAuspiceMetadata | Man page Source code |
| ReadGISAIDMetada | Man page Source code |
| SanitizeColumn | Man page Source code |
| StackedBarPlotPrevalence | Source code |
| SummarizeVariantsDatewise | Man page Source code |
| SummarizeVariantsMonthwise | Man page Source code |
| SummarizeVariantsWeekwise | Man page Source code |
| TotalSequencesPerMonthCountrywise | Man page Source code |
| TotalSequencesPerMonthStatewise | Man page Source code |
