FormatGISAIDMetadata: Format metadata.tar.x file downloaded from GISAID with some...
In saketkc/covmuller: A tool to model COVID19 variant prevalence using data from GISAID
FormatGISAIDMetadata R Documentation
Format metadata.tar.x file downloaded from GISAID with some missing columns
Description
Format metadata.tar.x file downloaded from GISAID with some missing columns
Usage
FormatGISAIDMetadata(
df,
collection_col = "Collection date",
submission_col = "Submission date"
)
Arguments
df
GISAID metadata dataframe
collection_col
Name of column representing date of collection (Collection date)
submission_col
Name of column representing date of submission (Submission date)
Value
A data frame with following extra columns:
DateCollected, MonthYearCollected, YearCollected, MonthCollected, WeekCollected
DateCollectedNumeric, MonthYearCollectedNumeric
DateSubmitted, MonthYearSubmitted, YearSubmitted, MonthSubmitted, WeekSubmitted
DateSubmittedNumeric, MonthYearSubmittedNumeric
saketkc/covmuller documentation built on April 19, 2024, 10:14 a.m.
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| FormatGISAIDMetadata | R Documentation |
Format metadata.tar.x file downloaded from GISAID with some missing columns
Description
Format metadata.tar.x file downloaded from GISAID with some missing columns
Usage
FormatGISAIDMetadata(
df,
collection_col = "Collection date",
submission_col = "Submission date"
)
Arguments
df |
GISAID metadata dataframe |
collection_col |
Name of column representing date of collection (Collection date) |
submission_col |
Name of column representing date of submission (Submission date) |
Value
A data frame with following extra columns: DateCollected, MonthYearCollected, YearCollected, MonthCollected, WeekCollected DateCollectedNumeric, MonthYearCollectedNumeric DateSubmitted, MonthYearSubmitted, YearSubmitted, MonthSubmitted, WeekSubmitted DateSubmittedNumeric, MonthYearSubmittedNumeric
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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