QFeatures-excel: Exports a 'QFeatures' object to a Excel file.

In samWieczorek/Dapar2: Tools for the Differential Analysis of Proteins Abundance with R

Exports a QFeatures object to a Excel file.

Description

This function exports an instance of the class QFeatures to a Excel file. The resulting file is composed of four sheets:

• ⁠quantitative data⁠ which contains the content of assay() object with a color code for each cell w.r.t. to cell quantitative metadata.

• metadata which is the content of rowData() with only one-dimensionnal data (i.e. the adjacencyMatrix and the qMetacell slots are not part of the sheet),

• ⁠exp. design⁠ which is the content of colData(). Each condition in the table is colored with a different color,

• ⁠quantitative metadata⁠ which is the content of qMetacell(). There is a color code for the different tags.

xxx

Usage

## S4 method for signature 'QFeatures'
write2excel(object, i = NULL, filename = "newFile", ...)

## S4 method for signature 'SummarizedExperiment'
write2excel(object, filename, exp.design, ...)

.write2excel(object, filename, exp.design)

addColors(wb, n, tags, colors)

Arguments

object	xxx
i	xxx
filename	xxx
...	xxx
exp.design	xxx
wb	A workbook
n	A integer(1) which is the number of sheet in the workbook.
tags	xxx
colors	A character() which contains the HEX code for colors. The size of this vector must be the same as the number of tags.

Value

A Excel file.

Author(s)

Samuel Wieczorek

Examples

data(ft, package='DaparToolshed')

#---------------------------------------
# Export the whole dataset
#---------------------------------------

write2excel(ft, filename = "foo")
unlink('foo.xls')
write2excel(ft, 1, "foo")
unlink('foo.xls')

samWieczorek/Dapar2 documentation built on Oct. 12, 2023, 9:54 a.m.