R/AllGenerics.R

In samWieczorek/Dapar2: Tools for the Differential Analysis of Proteins Abundance with R

setGeneric("t_test_sam", 
    function(object, ...) standardGeneric("t_test_sam"))

setGeneric("diff_analysis_sam", 
    function(object, ...) standardGeneric("diff_analysis_sam"))

setGeneric("normalizeD", 
    function(object, ...) standardGeneric("normalizeD"))

setGeneric("impute_dapar", 
    function(object, ...) standardGeneric("impute_dapar"))

setGeneric("UpdateMetacellAfterImputation", 
    function(object, ...) standardGeneric("UpdateMetacellAfterImputation"))
setGeneric("aggregateQmetacell", 
    function(object, ...) standardGeneric("aggregateQmetacell"))
setGeneric("aggregateFeatures4Prostar", 
    function(object, ...) standardGeneric("aggregateFeatures4Prostar"))
setGeneric("FinalizeAggregation", 
    function(object, ...) standardGeneric("FinalizeAggregation"))
setGeneric("filterFeaturesOneSE", 
    function(object, ...) standardGeneric("filterFeaturesOneSE"))

setGeneric("write2excel", 
    function(object, ...) standardGeneric("write2excel"))


setGeneric("GetUniqueTags", 
           function(object, ...) standardGeneric("GetUniqueTags"))


setGeneric("GetMetacellTags", 
           function(object, ...) standardGeneric("GetMetacellTags"))




setGeneric("ConnectedComp", 
           function(object, ...) standardGeneric("ConnectedComp"))
setGeneric("ConnectedComp<-", 
           function(object, ..., value) standardGeneric("ConnectedComp<-"))

setGeneric("qMetacell", 
    function(object, ...) standardGeneric("qMetacell"))
setGeneric("qMetacell<-", 
    function(object, ..., value) standardGeneric("qMetacell<-"))
setGeneric("typeDataset", 
    function(object, ...) standardGeneric("typeDataset"))
setGeneric("typeDataset<-", 
    function(object, ..., value) standardGeneric("typeDataset<-"))
setGeneric("idcol", 
    function(object, ...) standardGeneric("idcol"))
setGeneric("idcol<-", 
    function(object, ..., value) standardGeneric("idcol<-"))
setGeneric("parentProtId", 
    function(object, ...) standardGeneric("parentProtId"))
setGeneric("parentProtId<-", 
    function(object, ..., value) standardGeneric("parentProtId<-"))
setGeneric("analysis", 
    function(object, ...) standardGeneric("analysis"))
setGeneric("analysis<-", 
    function(object, ..., value) standardGeneric("analysis<-"))
setGeneric("version", 
    function(object, ...) standardGeneric("version"))
setGeneric("version<-", 
    function(object, ..., value) standardGeneric("version<-"))
setGeneric("design.qf", 
    function(object, ...) standardGeneric("design.qf"))
setGeneric("design.qf<-", 
    function(object, ..., value) standardGeneric("design.qf<-"))
setGeneric("params", 
    function(object, ...) standardGeneric("params"))
setGeneric("params<-", 
    function(object, ..., value) standardGeneric("params<-"))

setGeneric("GetUniqueTags", 
           function(object, ...) standardGeneric("GetUniqueTags"))


setGeneric("names_metacell", 
           function(object, ...) standardGeneric("names_metacell"))


setGeneric("GetHypoyhesisTest", 
    function(object, ...) standardGeneric("GetHypoyhesisTest"))
setGeneric("HypothesisTest", 
    function(object, ...) standardGeneric("HypothesisTest"))