wrap models to test WAPL This peforms Monte Carlo simulation for a given scenario, comparing 6 models together
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 |
n.rep: |
number of Monte Carlo simulation |
N: |
sample size for training data |
sgm: |
noise |
sim.seed: |
simulation seed |
group: |
group information, length n vector, if NULL, then no group selection applies |
s: |
scenario |
PosX.idx: |
true prognostic variable index |
m: |
numer of fold for cross validation |
lambda: |
A user supplied lambda sequence(ordered in decreasing value). Normally set it to null so the computing algorithm calculate it automatically. |
nlambda: |
number of lambda, default is 50 |
lambda.min.ratio: |
the ration between max lambda and minimal lambda |
splineP: |
Candidate value of number of basis, default is c(3:10) |
sgm_list: |
Candidate value sigma, used in rbf kernel for OWL/RWL |
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