optipred: Predictions for endogenous sequences
In santiago1234/iCodon: iCodon: Designing "ideal" coding (iCodon) sequences for customized expression level
optipred R Documentation
Predictions for endogenous sequences
Description
NOTE: see the file: data-raw/predict_endogenous_sequences.R where i generate this data
Predicted mRNA stability for endogenous genes in each species
Usage
optipred
Format
A data frame with 34,290 rows and 3 variables:
- gene_id
Ensembl gene id
- specie
The specie one of: human, fish, mouse, or xenopus
- optimality
predicted mRNA stability
santiago1234/iCodon documentation built on Nov. 2, 2023, 2:03 p.m.
R Package Documentation
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| optipred | R Documentation |
Predictions for endogenous sequences
Description
NOTE: see the file: data-raw/predict_endogenous_sequences.R where i generate this data Predicted mRNA stability for endogenous genes in each species
Usage
optipred
Format
A data frame with 34,290 rows and 3 variables:
- gene_id
Ensembl gene id
- specie
The specie one of: human, fish, mouse, or xenopus
- optimality
predicted mRNA stability
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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