selection | R Documentation |
produces a function for the selection. This function performs the following" 1. for a set of synonymous sequences predicts the mRNA stability with @param stability_predictor 2. Using the selection criterion @param optimization selects the fittest individual
selection(stability_predictor, optimization = TRUE)
stability_predictor |
mRNA stability preditor: takes as input a dna sequence and produces a predicted stability (decay rate) |
optimization |
logical: True for optimization (more stable sequence) and False for deoptimization (more unstable sequence) |
function, selector function that take as input:
This function contains the following arguments:
syn_daughters
character: synonymous sequences to evaluate (only for output function)
current_iteration
integer: current iteration (only for output function)
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