sarangian/RNASeqDEA: Differential Expression Analysis based on the read count data generated by either of Salmon, Kallisto, featureCounts and perform statistical analysis to discover quantitative changes in expression levels between two different experimental groups

Provide R tools and an environment for the statistical analysis of RNA-Seq projects: load and clean data, produce figures, with count files generated using Corset, Salmon, Kallisto or featureCounts and perform statistical analysis/testingDESeq2 or edgeR, export results and create final report.

Getting started

Package details

AuthorAditya Narayan Sarangi, Sucheta Tripathy
Bioconductor views RNASeq Software
MaintainerSTLAb <>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
sarangian/RNASeqDEA documentation built on Dec. 8, 2019, 5:24 p.m.