nDiffTotal: Number of differentially expressed features per comparison
In sarangian/RNASeqDEA: Differential Expression Analysis based on the read count data generated by either of Salmon, Kallisto, featureCounts and perform statistical analysis to discover quantitative changes in expression levels between two different experimental groups
Description
Usage
Arguments
Value
Author(s)
Description
Number of down- and up-regulated features per comparison
Usage
1
nDiffTotal(complete, alpha = 0.05)
Arguments
complete
list of data.frame containing features results (from exportResults.DESeq2() or exportResults.edgeR())
alpha
threshold to apply to the FDR
Value
A matrix with the number of up, down and total of features per comparison
Author(s)
Marie-Agnes Dillies and Hugo Varet
sarangian/RNASeqDEA documentation built on Dec. 8, 2019, 5:24 p.m.
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Description Usage Arguments Value Author(s)
Description
Number of down- and up-regulated features per comparison
Usage
1 | nDiffTotal(complete, alpha = 0.05)
|
Arguments
complete |
list of |
alpha |
threshold to apply to the FDR |
Value
A matrix with the number of up, down and total of features per comparison
Author(s)
Marie-Agnes Dillies and Hugo Varet
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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