exportResults.DESeq2: Export results for DESeq2 analyses

Description Usage Arguments Value Author(s)

View source: R/exportResults.DESeq2.R

Description

Export counts and DESeq2 results

Usage

1
exportResults.DESeq2(out.DESeq2, group, alpha = 0.05, export = TRUE)

Arguments

out.DESeq2

the result of run.DESeq2()

group

factor vector of the condition from which each sample belongs

alpha

threshold to apply to adjusted p-values

export

TRUE to export the results (up, down and complete table) in the tables directory

Value

A list of data.frame containing counts, pvalues, FDR, log2FC...

Author(s)

Marie-Agnes Dillies and Hugo Varet


sarangian/RNASeqDEA documentation built on Dec. 8, 2019, 5:24 p.m.