tss.danRer10: tss.danRer10 TSS locations
In sartorlab/chipenrich.data: Companion package to chipenrich
tss.danRer10 R Documentation
tss.danRer10 TSS locations
Description
A GRanges with all the TSSs for danRer10. Primarily used in the assign_peaks() function to report distance of a peak to the nearest TSS. Also used to build the QC plot with distribution of peaks to TSSs.
Usage
tss.danRer10
Format
A GRanges object with the following mcols:
- gene_id
The Entrez ID for the TSS
- symbol
The gene symbol for the TSS
Source
R packages: TxDb.Drerio.UCSC.danRer10.refGene_3.4.2 and org.Dr.eg.db_3.5.0.
sartorlab/chipenrich.data documentation built on Oct. 4, 2023, 5:21 p.m.
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| tss.danRer10 | R Documentation |
tss.danRer10 TSS locations
Description
A GRanges with all the TSSs for danRer10. Primarily used in the assign_peaks() function to report distance of a peak to the nearest TSS. Also used to build the QC plot with distribution of peaks to TSSs.
Usage
tss.danRer10
Format
A GRanges object with the following mcols:
- gene_id
The Entrez ID for the TSS
- symbol
The gene symbol for the TSS
Source
R packages: TxDb.Drerio.UCSC.danRer10.refGene_3.4.2 and org.Dr.eg.db_3.5.0.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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