tss.dm3: tss.dm3 TSS locations
In sartorlab/chipenrich.data: Companion package to chipenrich
tss.dm3 R Documentation
tss.dm3 TSS locations
Description
A GRanges with all the TSSs for dm3. Primarily used in the assign_peaks() function to report distance of a peak to the nearest TSS. Also used to build the QC plot with distribution of peaks to TSSs.
Usage
tss.dm3
Format
A GRanges object with the following mcols:
- gene_id
The Entrez ID for the TSS
- symbol
The gene symbol for the TSS
Source
R packages: TxDb.Dmelanogaster.UCSC.dm3.ensGene_3.2.2 and org.Dm.eg.db_3.5.0.
sartorlab/chipenrich.data documentation built on Oct. 4, 2023, 5:21 p.m.
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| tss.dm3 | R Documentation |
tss.dm3 TSS locations
Description
A GRanges with all the TSSs for dm3. Primarily used in the assign_peaks() function to report distance of a peak to the nearest TSS. Also used to build the QC plot with distribution of peaks to TSSs.
Usage
tss.dm3
Format
A GRanges object with the following mcols:
- gene_id
The Entrez ID for the TSS
- symbol
The gene symbol for the TSS
Source
R packages: TxDb.Dmelanogaster.UCSC.dm3.ensGene_3.2.2 and org.Dm.eg.db_3.5.0.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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