DietSeurat | R Documentation |
Keep only certain aspects of the Seurat object. Can be useful in functions that utilize merge as it reduces the amount of data in the merge
DietSeurat(
object,
layers = NULL,
features = NULL,
assays = NULL,
dimreducs = NULL,
graphs = NULL,
misc = TRUE,
counts = deprecated(),
data = deprecated(),
scale.data = deprecated(),
...
)
object |
A |
layers |
A vector or named list of layers to keep |
features |
Only keep a subset of features, defaults to all features |
assays |
Only keep a subset of assays specified here |
dimreducs |
Only keep a subset of DimReducs specified here (if
|
graphs |
Only keep a subset of Graphs specified here (if |
misc |
Preserve the |
counts |
Preserve the count matrices for the assays specified |
data |
Preserve the data matrices for the assays specified |
scale.data |
Preserve the scale data matrices for the assays specified |
... |
Ignored |
object
with only the sub-object specified retained
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