GroupCorrelationPlot: Boxplot of correlation of a variable (e.g. number of UMIs)...

In satijalab/seurat: Tools for Single Cell Genomics

Boxplot of correlation of a variable (e.g. number of UMIs) with expression data

Description

Boxplot of correlation of a variable (e.g. number of UMIs) with expression data

Usage

GroupCorrelationPlot(
  object,
  assay = NULL,
  feature.group = "feature.grp",
  cor = "nCount_RNA_cor"
)

Arguments

object	Seurat object
assay	Assay where the feature grouping info and correlations are stored
feature.group	Name of the column in meta.features where the feature grouping info is stored
cor	Name of the column in meta.features where correlation info is stored

Value

Returns a ggplot boxplot of correlations split by group

satijalab/seurat documentation built on May 11, 2024, 4:04 a.m.