View source: R/visualization.R
ISpatialDimPlot | R Documentation |
Visualize clusters spatially and interactively
ISpatialDimPlot(object, image = NULL, group.by = NULL, alpha = c(0.3, 1))
object |
A Seurat object |
image |
Name of the image to use in the plot |
group.by |
Name of meta.data column to group the data by |
alpha |
Controls opacity of spots. Provide as a vector specifying the min and max for SpatialFeaturePlot. For SpatialDimPlot, provide a single alpha value for each plot. |
Returns final plot as a ggplot object
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