SelectIntegrationFeatures5: Select integration features

In satijalab/seurat: Tools for Single Cell Genomics

Select integration features

Description

Select integration features

Usage

SelectIntegrationFeatures5(
  object,
  nfeatures = 2000,
  assay = NULL,
  method = NULL,
  layers = NULL,
  verbose = TRUE,
  ...
)

Arguments

object	Seurat object
nfeatures	Number of features to return for integration
assay	Name of assay to use for integration feature selection
method	Which method to pull. For HVFInfo and VariableFeatures, choose one from one of the following: “vst” “sctransform” or “sct” “mean.var.plot”, “dispersion”, “mvp”, or “disp”
layers	Name of layers to use for integration feature selection
verbose	Print messages
...	Arguments passed on to method

satijalab/seurat documentation built on March 20, 2024, 8:41 p.m.