View source: R/preprocessing.R
SubsetByBarcodeInflections | R Documentation |
This convenience function subsets a Seurat object based on calculated inflection points.
SubsetByBarcodeInflections(object)
object |
Seurat object |
See [CalculateBarcodeInflections()] to calculate inflection points and [BarcodeInflectionsPlot()] to visualize and test inflection point calculations.
Returns a subsetted Seurat object.
Robert A. Amezquita, robert.amezquita@fredhutch.org
CalculateBarcodeInflections
BarcodeInflectionsPlot
data("pbmc_small")
pbmc_small <- CalculateBarcodeInflections(
object = pbmc_small,
group.column = 'groups',
threshold.low = 20,
threshold.high = 30
)
SubsetByBarcodeInflections(object = pbmc_small)
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