Files in sbg/sevenbridges-r
Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R

.Rbuildignore
.gitattributes
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
NEWS.md R/api-http.R R/api-misc.R R/api-utils.R R/class-all.R R/class-app.R R/class-auth-utils.R R/class-auth.R R/class-billing.R R/class-cwl.R R/class-division.R R/class-files.R R/class-filesystem.R R/class-flow.R R/class-item.R R/class-marker.R R/class-member.R R/class-meta.R R/class-project.R R/class-ratelimit.R R/class-task.R R/class-team.R R/class-teammember.R R/class-tool.R R/class-upload.R R/class-user.R R/class-volume.R R/misc-handler.R R/misc-lift.R R/misc-uploader.R R/sevenbridges-package.R R/zzz.R README.md
_pkgdown.yml
appveyor.yml
docs/LICENSE-text.html
docs/articles/api.html
docs/articles/apps.html
docs/articles/bioc-workflow.html
docs/articles/cgc-datasets.html
docs/articles/docker.html
docs/articles/fig/diagram_rnaseq.png
docs/articles/index.html
docs/articles/rstudio.html
docs/articles/sevenbridges.css
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/extra.css
docs/favicon.ico
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/App-class.html
docs/reference/Auth-class.html
docs/reference/Binding.html
docs/reference/CCBList.html
docs/reference/CWL.html
docs/reference/CommandInputParameter-class.html
docs/reference/CommandInputSchema-class.html
docs/reference/CommandLineBinding-class.html
docs/reference/CommandLineTool.html
docs/reference/CommandOutputBinding-class.html
docs/reference/CommandOutputParameter-class.html
docs/reference/CommandOutputSchema-class.html
docs/reference/DSCList.html
docs/reference/Enum.html
docs/reference/Expression-class.html
docs/reference/ExpressionTool-class.html
docs/reference/FS-class.html
docs/reference/File-class.html
docs/reference/Files-class.html
docs/reference/Flow.html
docs/reference/Handler-class.html
docs/reference/Item-class.html
docs/reference/Metadata.html
docs/reference/Parameter.html
docs/reference/Process.html
docs/reference/ProcessRequirement.html
docs/reference/Schema.html
docs/reference/TaskHook.html
docs/reference/Tool-class.html
docs/reference/Workflow.html
docs/reference/WorkflowStep.html
docs/reference/addIdNum.html
docs/reference/api.html
docs/reference/as-methods.html
docs/reference/batch.html
docs/reference/cli_list_projects.html
docs/reference/cli_list_tags.html
docs/reference/cli_upload.html
docs/reference/convert_app.html
docs/reference/cwl-utils.html
docs/reference/delete-methods.html
docs/reference/download-methods.html
docs/reference/get_token.html
docs/reference/get_uploader.html
docs/reference/index.html
docs/reference/input_output_matrix.html
docs/reference/link.html
docs/reference/link_what.html
docs/reference/project_details.html
docs/reference/project_members.html
docs/reference/requirements.html
docs/reference/response-methods.html
docs/reference/sbg_get_env.html
docs/reference/sbg_set_env.html
docs/reference/setListClass.html
docs/reference/set_test_env.html
docs/reference/sevenbridges-package.html
docs/reference/shorthand-cwl.html
docs/reference/status_check.html
docs/reference/tag-methods.html
docs/reference/test_tool_bunny.html
docs/reference/test_tool_cwlrun.html
docs/reference/test_tool_rabix.html
docs/reference/upload_complete_all.html
docs/reference/upload_complete_part.html
docs/reference/upload_delete.html
docs/reference/upload_info.html
docs/reference/upload_info_part.html
docs/reference/upload_init.html
inst/docker/reporttool/Dockerfile
inst/docker/reporttool/rabix/generator.R
inst/docker/reporttool/rabix/reporttool.json
inst/docker/reporttool/src/report.R
inst/docker/rnaseqGene/Dockerfile
inst/docker/rnaseqGene/rabix/generator.R
inst/docker/rnaseqGene/rabix/rnaseqGene.json
inst/docker/rnaseqGene/report/rnaseqGene.Rmd inst/docker/rnaseqGene/src/performDE.R
inst/docker/sevenbridges/Dockerfile
inst/docker/sevenbridges/rabix/generator.R
inst/docker/sevenbridges/rabix/runif.json
inst/docker/sevenbridges/rabix/runif2.json
inst/docker/sevenbridges/report/report.Rmd inst/docker/sevenbridges/src/runif.R inst/docker/sevenbridges/src/runif2spin.R inst/docker/sevenbridges/src/runif_args.R
inst/docker/sevenbridges/src/shiny-server.conf
inst/docker/sevenbridges/src/shiny-server.sh
inst/docker/sevenbridges/src/supervisord.conf
inst/docker/testenv/Dockerfile
inst/extdata/app/dna2protein/README.md
inst/extdata/app/dna2protein/data/input.txt
inst/extdata/app/dna2protein/dna2protein.cwl.json
inst/extdata/app/dna2protein/inputs.json
inst/extdata/app/dna2protein/transcribe.cwl.json
inst/extdata/app/dna2protein/translate.cwl.json
inst/extdata/app/flow_star.json
inst/extdata/app/tool_star.json
inst/extdata/app/tool_unpack_fastq.json
inst/extdata/bam_index.json
inst/extdata/download.txt
inst/extdata/runif.json
inst/extdata/sample1.fastq
inst/extdata/sample1.fastq.meta
inst/extdata/test-easy-api.R inst/liftr/runif.Rmd
logo.png
man/App-class.Rd man/Auth-class.Rd man/Binding.Rd man/CCBList.Rd man/CWL.Rd man/CommandInputParameter-class.Rd man/CommandInputSchema-class.Rd man/CommandLineBinding-class.Rd man/CommandLineTool.Rd man/CommandOutputBinding-class.Rd man/CommandOutputParameter-class.Rd man/CommandOutputSchema-class.Rd man/DSCList.Rd man/Enum.Rd man/Expression-class.Rd man/ExpressionTool-class.Rd man/FS-class.Rd man/File-class.Rd man/Files-class.Rd man/Flow.Rd man/Handler-class.Rd man/Item-class.Rd man/Metadata.Rd man/Parameter.Rd man/Process.Rd man/ProcessRequirement.Rd man/Schema.Rd man/TaskHook.Rd man/Tool-class.Rd man/Workflow.Rd man/WorkflowStep.Rd man/addIdNum.Rd man/api.Rd man/as-methods.Rd man/batch.Rd man/cli_list_projects.Rd man/cli_list_tags.Rd man/cli_upload.Rd man/convert_app.Rd man/cwl-utils.Rd man/delete-methods.Rd man/download-methods.Rd man/get_token.Rd man/get_uploader.Rd man/input_output_matrix.Rd man/link.Rd man/link_what.Rd man/project_details.Rd man/project_members.Rd man/requirements.Rd man/response-methods.Rd man/sbg_get_env.Rd man/sbg_set_env.Rd man/setListClass.Rd man/set_test_env.Rd man/sevenbridges-package.Rd man/shorthand-cwl.Rd man/status_check.Rd man/tag-methods.Rd man/test_tool_bunny.Rd man/test_tool_cwlrun.Rd man/test_tool_rabix.Rd man/upload_complete_all.Rd man/upload_complete_part.Rd man/upload_delete.Rd man/upload_info.Rd man/upload_info_part.Rd man/upload_init.Rd
pkgdown/extra.css
sevenbridges.Rproj
tests/testthat.R tests/testthat/test-easy-Auth.R tests/testthat/test-test_tools.R vignettes/api.Rmd vignettes/apps.Rmd vignettes/bioc-workflow.Rmd vignettes/cgc-datasets.Rmd vignettes/docker.Rmd
vignettes/fig/bwa-mem.png
vignettes/fig/diagram_rnaseq.png
vignettes/rstudio.Rmd
vignettes/sevenbridges.css
sbg/sevenbridges-r documentation built on March 22, 2019, 4:49 a.m.