pca_loading: Plotting PCA Loading Plot
In schyen/somefxns: Generic Tools to Help with Analysis
Description
Usage
Arguments
Value
Description
Plotting PCA Loading Plot
Usage
1
pca_loading(pca_data, PCs = 1:4, label = NULL, title = NULL)
Arguments
pca_data
the PCA model output of prcomp()
PCs
vector of Principal Components to consider
label
vector of compounds that should be labelled on the score plot;
to label all compounds (or bins), set label = 'all'
title
string; title of loading plot
Value
list of: p ggplot object with generated plot
collected_data all the data used to plot pca data
using ggplot2. can use collected_data for
further customization using ggplot
schyen/somefxns documentation built on Aug. 6, 2019, 2:26 p.m.
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Description Usage Arguments Value
Description
Plotting PCA Loading Plot
Usage
1 | pca_loading(pca_data, PCs = 1:4, label = NULL, title = NULL)
|
Arguments
pca_data |
the PCA model output of prcomp() |
PCs |
vector of Principal Components to consider |
label |
vector of compounds that should be labelled on the score plot; to label all compounds (or bins), set label = 'all' |
title |
string; title of loading plot |
Value
list of: p ggplot object with generated plot
collected_data all the data used to plot pca data
using ggplot2. can use collected_data for
further customization using ggplot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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