survivalCurve: survivalCurve

In schyen/somefxns: Generic Tools to Help with Analysis

Description

plotting survival curve of MIC plate assay

Usage

survivalCurve(pdata, well_include = NULL,
  timepoint = max(pdata$Repeat), x = "wellconc", y = "survival",
  preview = TRUE)

Arguments

pdata	dataframe. MIC data with metadata, adjusted absorbance, and percent survival
well_include	string or vector of string. Default NULL. Which wells to include in analysis
timepoint	Default 99. Which timepoint in the growth curve should the survival curve be made from. Should correspond to the Repeat value in the reading. If multiple timepoints provided, produces survival curve for each timepoint.
x	string. Default 'minute'. x axis of growth curve.
y	string. Default 'survival'. y axis of growth curve.
preview	logic. Defulat TRUE. Preview plot

Value

growth curve. ggplot.

schyen/somefxns documentation built on Aug. 6, 2019, 2:26 p.m.