getAbxSingle: Get the regular antibiotic susceptibility / resistance...

In scottdaniel/bacphene: Imports Bacterial Phenotype Data Into R

Get the regular antibiotic susceptibility / resistance information from a single bacdive entry

Description

Get the regular antibiotic susceptibility / resistance information from a single bacdive entry

Usage

getAbxSingle(bacdive_entry)

Arguments

bacdive_entry

A single entry representing a strain within a bacdive list.

Details

Some antibiotic information is encoded as an antibiogram, see getAntibiogramSingle

Value

A dataframe of antibiotic susceptibility / resistance information for a single bacdive entry.

Examples

## Not run: 
abx_df <- bind_rows(lapply(list_holder, getAbxSingle))
# OR
single_strain <- getAbxSingle(list_holder[[1]])

## End(Not run)

scottdaniel/bacphene documentation built on March 25, 2023, 12:51 p.m.