getMorphology: Extracts cell morphology data from a bacdive list

In scottdaniel/bacphene: Imports Bacterial Phenotype Data Into R

Extracts cell morphology data from a bacdive list

Description

Extracts cell morphology data from a bacdive list

Usage

getMorphology(list_holder = list_holder)

Arguments

list_holder

A list object containing strain information already present in the R environment.

Details

Essentially a wrapper for applying getMorphologySingle to a list and turning the result into a dataframe. Also adds the "date_downloaded" attribute from the list to the dataframe.

Value

A dataframe of cell morphology information about taxa in the list.

Examples

## Not run: 
morphology_df <- getMorphology(list_holder)

## End(Not run)

scottdaniel/bacphene documentation built on March 25, 2023, 12:51 p.m.