read.computeMatrix.file: 'computeMatrix' *.gz file reader
In sebastian-gregoricchio/Rseb: An R-package for NGS data managing and visualization
View source: R/read.computeMatrix.file.R
read.computeMatrix.file R Documentation
computeMatrix *.gz file reader
Description
The function reads a matrix.file.gz generated by deepTools/computeMatrix function or by computeMatrix.deeptools. The value can be passed to plot.density.profile function.
Usage
read.computeMatrix.file(matrix.file)
Arguments
matrix.file
A string indicating indicating the full path to the matrix.file.gz generated by deepTools/computeMatrix function or by computeMatrix.deeptools.
Value
The functions returns a named list containing:
metadatadata.frame with the information gotten from the matrix_file.gz
matrix.datadata.frame with the scores gotten from
original.file.pathwith full path to the original matrix_file.gz.
This list can be passed as it is to the function plot.density.profile.
sebastian-gregoricchio/Rseb documentation built on June 14, 2024, 12:22 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/read.computeMatrix.file.R
| read.computeMatrix.file | R Documentation |
computeMatrix *.gz file reader
Description
The function reads a matrix.file.gz generated by deepTools/computeMatrix function or by computeMatrix.deeptools. The value can be passed to plot.density.profile function.
Usage
read.computeMatrix.file(matrix.file)
Arguments
matrix.file |
A string indicating indicating the full path to the matrix.file.gz generated by deepTools/computeMatrix function or by computeMatrix.deeptools. |
Value
The functions returns a named list containing:
metadatadata.frame with the information gotten from the matrix_file.gzmatrix.datadata.frame with the scores gotten fromoriginal.file.pathwith full path to the original matrix_file.gz.
This list can be passed as it is to the function plot.density.profile.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.