get.observed.ct: get.observed.ct
In seriph78/COTAN_stable: COexpression Tables ANalysis
Description
Usage
Arguments
Value
Examples
Description
This function is used to get the observed contingency table for a given pair of genes.
Usage
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get.observed.ct(object, g1, g2)
## S4 method for signature 'scCOTAN'
get.observed.ct(object, g1, g2)
Arguments
object
The cotan object
g1
A gene
g2
The other gene
Value
A contingency table as dataframe
Examples
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data("ERCC.cotan")
g1 = rownames(ERCC.cotan@raw)[sample(nrow(ERCC.cotan@raw), 1)]
g2 = rownames(ERCC.cotan@raw)[sample(nrow(ERCC.cotan@raw), 1)]
get.observed.ct(object = ERCC.cotan, g1 = g1, g2 = g2)
seriph78/COTAN_stable documentation built on Dec. 23, 2021, 12:19 a.m.
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Description Usage Arguments Value Examples
Description
This function is used to get the observed contingency table for a given pair of genes.
Usage
1 2 3 4 | get.observed.ct(object, g1, g2)
## S4 method for signature 'scCOTAN'
get.observed.ct(object, g1, g2)
|
Arguments
object |
The cotan object |
g1 |
A gene |
g2 |
The other gene |
Value
A contingency table as dataframe
Examples
1 2 3 4 | data("ERCC.cotan")
g1 = rownames(ERCC.cotan@raw)[sample(nrow(ERCC.cotan@raw), 1)]
g2 = rownames(ERCC.cotan@raw)[sample(nrow(ERCC.cotan@raw), 1)]
get.observed.ct(object = ERCC.cotan, g1 = g1, g2 = g2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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