scCOTAN-class: scCOTAN-class

In seriph78/COTAN_stable: COexpression Tables ANalysis

Description

Define my COTAN structure

Value

the object class

Slots

raw

ANY. To store the raw data matrix

raw.norm

ANY. To store the raw data matrix divided for the cell efficiency estimated (nu)

coex

ANY. The coex matrix (sparce)

nu

vector.

lambda

vector.

a

vector.

hk

vector.

n_cells

numeric.

meta

data.frame.

yes_yes

ANY.

clusters

vector.

cluster_data

data.frame.

Examples

data("ERCCraw")
obj = new("scCOTAN",raw = data)

seriph78/COTAN_stable documentation built on Dec. 23, 2021, 12:19 a.m.