base_plot: Generate base IDOC plot upon which more annotation layers can...

In shaliulab/idocr: Analyze traces created in the Individual Drosophila Optogenetics Conditioner (IDOC)

Generate base IDOC plot upon which more annotation layers can be added

Description

The base plot contains all individual panels, dots to mark the fly positions

Usage

base_plot(
  gg,
  data,
  limits,
  line_alpha = 1,
  downward = TRUE,
  nrow = 1,
  ncol = 20,
  orientation = "y"
)

Arguments

gg	ggplot2 object
data
limits	Position of ticks in space axis
line_alpha	Alpha of position trace
downward	Whether the 0 should be at the top (TRUE) or the bottom (FALSE) of the plot
nrow	Number of rows used for facetting data
ncol	Number of cols used for facetting data

Value

gg ggplot2 object

See Also

mark_space()

mark_time()

shaliulab/idocr documentation built on June 1, 2025, 4:59 p.m.