export_dataset: Export analysis results to experiment_folder

In shaliulab/idocr: Analyze traces created in the Individual Drosophila Optogenetics Conditioner (IDOC)

Export analysis results to experiment_folder

Description

Generate the preference index table Generate the summary table

Usage

export_dataset(
  experiment_folder,
  result_folder,
  dataset,
  analysis,
  suffix,
  ...
)

Arguments

experiment_folder	Path to folder containing IDOC results .csv files
result_folder	Path to a folder where to save results. If not passaed, it is set to experiment_folder
dataset	List of raw data including: roi: every row records the position of one animal at one point in time controller: every row records the status of all IDOC stimulus at one point in time limits border
analysis	List of processed data including: annotation: every row is a decision zone exit and its appetitive / aversive value pi: preference index scored by each animal
suffix	A character (word) that will differentiate resulting output from other output produced on the same experiment folder. Useful for segmenting the experiment into different periods of interest and analyzing these periods separately.
...	Extra arguments to export_summary
summary	Whether to export a summary or not

See Also

export_pi_summary()

export_summary()

shaliulab/idocr documentation built on June 1, 2025, 4:59 p.m.