export_pi_summary: Export the preference index to a csv file

In shaliulab/idocr: Analyze traces created in the Individual Drosophila Optogenetics Conditioner (IDOC)

Export the preference index to a csv file

Description

Export the preference index to a csv file

Usage

export_pi_summary(
  experiment_folder,
  pi,
  result_folder = NULL,
  output_csv = NULL,
  suffix = ""
)

Arguments

experiment_folder	Path to folder containing IDOC results .csv files
pi	Dataframe to be exported. Should contain a column named preference_index
result_folder	Path to a folder where to save results. If not passaed, it is set to experiment_folder
output_csv	Path of csv output. If not provided, a new file in the experiment folder with key SUMMARY is produced
suffix	A character (word) that will differentiate resulting output from other output produced on the same experiment folder. Useful for segmenting the experiment into different periods of interest and analyzing these periods separately.

shaliulab/idocr documentation built on June 1, 2025, 4:59 p.m.