weightMatrix: weightMatrix

In shazanfar/DCARS: Differential Correlation across Ranked Samples

Description

the weightMatrix function

Usage

weightMatrix(n, type = "triangular", span = NULL, plot = FALSE)

Arguments

n	the number of samples, same as number of columns of data
type	one of "harmonic", "triangular" or "block"
span	proportion of samples to include on either side, default is 0.5
plot	if TRUE, a heatmap of weight matrix will be generated

Value

matrix an n*n matrix is generated corresponding to the weights for each sample

Examples

weightMatrix(100)
weightMatrix(100, plot = TRUE)
weightMatrix(100, type = "triangular", span = 0.1, plot = TRUE)
weightMatrix(100, type = "block", plot = TRUE)
weightMatrix(100, type = "harmonic", plot = TRUE)

shazanfar/DCARS documentation built on Oct. 14, 2020, 11:11 a.m.