Files in shbrief/RunTerraWorkflow
Run workflows implemented in Terra/AnVIL workspace
.Rbuildignore
.gitignore
AnVILWorkflow.Rproj
DESCRIPTION
NAMESPACE
NEWS
R/AnVILBrowse.R
R/availableAnalysis.R
R/cloneWorkspace.R
R/collectAllMeta.R
R/currentInput.R
R/findInputName.R
R/getDashboard.R
R/getMetaTables.R
R/getOutput.R
R/getWorkflowConfig.R
R/monitorWorkflow.R
R/runWorkflow.R
R/setCloudEnv.R
R/stopWorkflow.R
R/updateInput.R
R/utils.R
README.md
_pkgdown.yml
inst/extdata/AnVILdata.csv
inst/extdata/AnVILworkflows.csv
inst/extdata/AnVILworkspaces.csv
inst/extdata/curated_cols.txt
inst/extdata/date_of_last_update.txt
inst/extdata/map.tsv
inst/script/create_metadata_tables.R
inst/script/last_updated.sh
inst/script/map
man/AnVILBrowse.Rd
man/availableAnalysis.Rd
man/cloneWorkspace.Rd
man/currentInput.Rd
man/dot-biobakery_currentInput.Rd
man/dot-getAgeMinMax.Rd
man/dot-get_workflow_fullname.Rd
man/dot-get_workspace_fullname.Rd
man/dot-nonMetadataOutputs.Rd
man/dot-search_keyword.Rd
man/dot-stop_quietly.Rd
man/dot-tableToString.Rd
man/findInputName.Rd
man/getAllDataTables.Rd
man/getAllWorkflows.Rd
man/getAllWorkspaces.Rd
man/getDashboard.Rd
man/getData.Rd
man/getOutput.Rd
man/getWorkflowConfig.Rd
man/getWorkflows.Rd
man/getWorkspaces.Rd
man/monitorWorkflow.Rd
man/runWorkflow.Rd
man/setCloudEnv.Rd
man/stopWorkflow.Rd
man/updateInput.Rd
update.sh
vignettes/runnable_workflow.png
vignettes/salmon.Rmd
vignettes/salmon_test_outputs.csv
