checkUniverseAppropriateness: Check universe appropriateness

Description Usage Arguments Value Examples

View source: R/LOLA.R

Description

Checks to see if the universe is appropriate for the userSets Anything in the userSets should be present in the universe. In addition, 2 different regions in the userSets should not overlap the same region in the universe

Usage

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Arguments

userSets

Regions of interest

userUniverse

Regions tested for inclusion in userSets

cores

Number of processors

fast

Skip the (slow) test for many-to-many relationships

Value

No return value.

Examples

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data("sample_input", package="LOLA") # load userSet
data("sample_universe", package="LOLA") # load userUniverse
checkUniverseAppropriateness(userSets, userUniverse)

sheffien/LOLA documentation built on May 7, 2018, 12:58 a.m.