Man pages for shenlab-sinai/geneoverlap-old
Test and visualize gene overlaps
| drawHeatmap | Visualize GeneOverlapMatrix objects as heatmaps |
| GeneOverlap | Test overlap between two gene lists using Fisher's exact... |
| GeneOverlapMatrix | Matrix representation of the pairwise overlaps between two... |
| GeneOverlap-package | Test and visualize overlaps between gene lists |
| getGenomeSize | Accessors for the "genome.size" slot of the GeneOverlap class |
| getList | Accessors for the "listA" and "listB" slots of GeneOverlap... |
| getReadonly | Read-only accessors for the "intersection", "union",... |
| getReadonlyMatrix | Read-only accessors for the various slots of the... |
| gs.RNASeq | Genome size based on RNA-seq data |
| hESC.ChIPSeq.list | ChIP-seq gene lists |
| hESC.RNASeq.list | RNA-seq gene lists |
| newGeneOverlap | Constructor for the GeneOverlap class |
| newGOM | Constructor for the GeneOverlapMatrix class |
| testGeneOverlap | Test function for the GeneOverlap class |
