plotFrags: Plot fragments generated from multiple strand displacement

Description Usage Arguments Value See Also Examples

Description

Take a data.frame with columns start, end, strand (e.g. the output of enumerateAmplifications) and plot an arrow representation of the fragments to the current device.

Usage

1
plotFrags(frags, label = TRUE)

Arguments

frags

A data.frame with columns start, end, strand (and name if label is TRUE) e.g. the output of enumerateAmplifications

label

TRUE or FALSE if fragments should be labeled with name from the name column of frags

Value

NULL. Draws plot to current device

See Also

enumerateAmplifications

Examples

1
2
frags<-enumerateAmplifications(c(10,20,30),c(40,50,60))
plotFrags(frags)

sherrillmix/ampCountR documentation built on May 29, 2019, 9:24 p.m.