Description Usage Arguments Author(s)
Apply the standard set of indel filters on a dataframe generated by the ShlienLab SSM pipeline.
1 |
data |
R dataframe from the ShlienLab SSM pipeline (required). |
source |
Type of library sequenced (default: WXS – Must be one of WGS, WXS, CPANEL). |
coverage |
Filter based on coverage criteria from library type defined in source (default: TRUE). |
indels |
Vector containing labels for indels (default: c('ins', 'del')). |
Richard J. de Borja
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